Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tfb1m ENSDARG00000040727

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Description

transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]

Gene Synonyms

im:7151479, zgc:153625

Location

Chromosome 17: 49,220,126-49,280,428 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059658.8	tfb1m-201	1711	269aa	ENSDARP00000059657.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169207.2	tfb1m-203	1372	354aa	ENSDARP00000138823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU10	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000150172.2	tfb1m-202	879	254aa	ENSDARP00000124704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2J7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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