Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: scfd2 ENSDARG00000040005

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Description

sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]

Gene Synonyms

si:dkey-161n17.2, zgc:110750

Location

Chromosome 20: 22,799,641-23,021,279 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 2 transcripts (splice variants), 229 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131132.3	scfd2-202	2379	681aa	ENSDARP00000104899.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000058527.7	scfd2-201	1669	517aa	ENSDARP00000058526.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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