Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pcdh2aa1 ENSDARG00000037695

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Description

protocadherin 2 alpha a 1 [Source:ZFIN;Acc:ZDB-GENE-041118-13]

Gene Synonyms

pcdh2a8, pcdh2aa1-vCP

Location

Chromosome 14: 2,123,323-2,327,853 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 47 orthologues and 64 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189869.1	pcdh2aa1-202	3183	935aa	ENSDARP00000157530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8S0H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114302.2	pcdh2aa1-201	2352	784aa	ENSDARP00000100882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE55	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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