Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pfdn6 ENSDARG00000037108

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Description

prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]

Gene Synonyms

zgc:66282

Location

Chromosome 14: 30,550,397-30,557,637 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053936.7	pfdn6-201	684	126aa	ENSDARP00000053935.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SX94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183141.1	pfdn6-202	1142	125aa	ENSDARP00000156776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QTG0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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