Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: trmt10a ENSDARG00000036678

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Description

tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]

Gene Synonyms

zmp:0000000591

Location

Chromosome 7: 18,702,534-18,712,554 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175450.2	trmt10a-205	3769	340aa	ENSDARP00000143482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122564.4	trmt10a-201	1229	340aa	ENSDARP00000109893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBE2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173517.2	trmt10a-202	775	166aa	ENSDARP00000142879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSR2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173905.2	trmt10a-204	691	216aa	ENSDARP00000142989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NT17	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173730.2	trmt10a-203	1143	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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