Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nt5c1aa ENSDARG00000035883

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Description

5'-nucleotidase, cytosolic IAa [Source:ZFIN;Acc:ZDB-GENE-070705-423]

Gene Synonyms

nt5c1a, si:dkey-255n2.1

Location

Chromosome 19: 32,766,423-32,804,535 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175613.2	nt5c1aa-203	5346	384aa	ENSDARP00000143756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000052098.5	nt5c1aa-201	5301	369aa	ENSDARP00000052097.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DJ73	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145790.2	nt5c1aa-202	963	320aa	ENSDARP00000116333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7I1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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