Gene: nup58 ENSDARG00000033965

Description

nucleoporin 58 [Source:ZFIN;Acc:ZDB-GENE-040426-2326]

Gene Synonyms

nupl1, wu:fc45d07, wu:fi14f12, wu:fi21d10, zgc:113941, zgc:85711

Location

GRCz11:CM002908.2

About this gene

This gene has 4 transcripts (splice variants) and 216 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019350.9	nup58-201	2587	567aa	ENSDARP00000022894.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126395.2	nup58-202	2337	437aa	ENSDARP00000108245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWS2	-
ENSDART00000144336.3	nup58-204	1177	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135757.2	nup58-203	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary