Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smarcb1a ENSDARG00000033647

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:NCBI gene;Acc:799716]

Gene Synonyms

zgc:92517

Location

Chromosome 8: 30,929,704-30,944,491 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 144 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049944.9	smarcb1a-201	1512	373aa	ENSDARP00000049943.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U379	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191717.1	smarcb1a-203	1469	366aa	ENSDARP00000150055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG87	-
ENSDART00000128792.3	smarcb1a-202	756	229aa	ENSDARP00000109356.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NQ54	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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