Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: clcn6 ENSDARG00000032577

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Description

chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]

Gene Synonyms

wu:fb95f01

Location

Chromosome 8: 48,629,495-48,669,127 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000047134.8	clcn6-201	3082	863aa	ENSDARP00000047133.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F798	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163698.2	clcn6-203	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000159484.2	clcn6-202	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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