Gene: sptlc3 ENSDARG00000030743

Description

serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]

Gene Synonyms

si:dkey-246k9.1

Location

GRCz11:CM002897.2

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues, 6 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184843.1	sptlc3-203	2510	553aa	ENSDARP00000146370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047552.8	sptlc3-201	2101	553aa	ENSDARP00000047551.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQP7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134573.2	sptlc3-202	1020	204aa	ENSDARP00000116719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG23	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary