Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ssbp3b ENSDARG00000030155

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Description

single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]

Gene Synonyms

SSDP1a, id:ibd1109, zgc:63791

Location

Chromosome 8: 18,010,568-18,036,639 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 4 transcripts (splice variants), 224 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039887.7	ssbp3b-201	2688	349aa	ENSDARP00000039886.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PGU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000121984.3	ssbp3b-202	3144	373aa	ENSDARP00000109873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0EWT5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144532.2	ssbp3b-204	859	254aa	ENSDARP00000113829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI58	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136756.2	ssbp3b-203	268	69aa	ENSDARP00000118530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIG1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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