Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: susd6 ENSDARG00000030116

.

Description

sushi domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8832]

Gene Synonyms

fk24g06, si:dkey-11e23.5, wu:fk24g06, zgc:154022

Location

Chromosome 20: 28,885,990-28,932,038 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 49 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153082.2	susd6-202	2081	364aa	ENSDARP00000127300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000046042.8	susd6-201	4966	359aa	ENSDARP00000046041.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.