Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: mtss1la ENSDARG00000028943

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Description

MTSS I-BAR domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030219-89]

Gene Synonyms

id:ibd5126, mtss1l, si:ch211-15i6.4

Location

Chromosome 18: 14,772,474-14,836,862 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124843.4	mtss1la-202	2386	755aa	ENSDARP00000112029.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000045232.7	mtss1la-201	2283	760aa	ENSDARP00000045231.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QM51	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000144660.2	mtss1la-203	1211	403aa	ENSDARP00000119556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7X0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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