Gene: lin7c ENSDARG00000027322

Description

lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]

Gene Synonyms

fb75b09, wu:fb75b09, zgc:101881

Location

GRCz11:CM002891.2

About this gene

This gene has 2 transcripts (splice variants), 211 orthologues, 3 paralogues and is associated with 7 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146720.3	lin7c-201	4301	201aa	ENSDARP00000118823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66IB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000188398.1	lin7c-202	1523	204aa	ENSDARP00000154898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QIA2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary