Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: kcnn1b ENSDARG00000023546

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Description

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]

Gene Synonyms

kcnn1, si:ch211-200a16.1, sk1

Location

Chromosome 8: 13,244,371-13,315,567 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 4 transcripts (splice variants), 194 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014528.9	kcnn1b-201	1180	235aa	ENSDARP00000007813.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LY45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000132685.3	kcnn1b-202	1800	544aa	ENSDARP00000115554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LY44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168635.2	kcnn1b-204	1644	547aa	ENSDARP00000130450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC13	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000142596.2	kcnn1b-203	1410	338aa	ENSDARP00000115684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7U8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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