Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: phf11 ENSDARG00000021677

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Description

PHD finger protein 11 [Source:ZFIN;Acc:ZDB-GENE-081104-417]

Gene Synonyms

si:dkey-46k9.12

Location

Chromosome 9: 29,616,854-29,634,354 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 4 transcripts (splice variants), 58 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033902.9	phf11-201	1914	531aa	ENSDARP00000031289.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R115	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143493.3	phf11-203	936	306aa	ENSDARP00000119825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDB3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147481.3	phf11-204	1971	207aa	ENSDARP00000112678.1	Nonsense mediated decay	E9QD48	-
ENSDART00000135399.2	phf11-202	789	83aa	ENSDARP00000117639.1	Nonsense mediated decay	F1QY78	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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