Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: strbp ENSDARG00000021455

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Description

spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]

Gene Synonyms

sb:cb627, si:ch211-232m7.1

Location

Chromosome 10: 9,834,896-10,018,794 reverse strand.

GRCz11:CM002894.2

About this gene

This gene has 5 transcripts (splice variants), 231 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191023.1	strbp-205	4724	690aa	ENSDARP00000151771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130734.3	strbp-202	4681	690aa	ENSDARP00000106616.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB35	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129151.4	strbp-201	2396	690aa	ENSDARP00000104616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB35	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132375.3	strbp-203	757	161aa	ENSDARP00000112694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD44	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137392.2	strbp-204	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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