Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: slmapb ENSDARG00000020764

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Description

sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]

Gene Synonyms

slmap, zgc:55817

Location

Chromosome 23: 19,590,006-19,604,413 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 6 transcripts (splice variants), 66 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021231.8	slmapb-201	2071	376aa	ENSDARP00000024693.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134865.2	slmapb-203	1268	199aa	ENSDARP00000115180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9I6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170149.2	slmapb-206	1142	376aa	ENSDARP00000135943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBQ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140422.2	slmapb-205	954	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132303.2	slmapb-202	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138046.2	slmapb-204	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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