Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: usp2a ENSDARG00000020107

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Description

ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]

Gene Synonyms

zgc:92134

Location

Chromosome 15: 20,900,627-20,939,579 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 5 transcripts (splice variants), 170 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134053.4	usp2a-201	2641	394aa	ENSDARP00000119800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2P1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152371.3	usp2a-203	1274	311aa	ENSDARP00000126710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GE00	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152648.3	usp2a-205	888	238aa	ENSDARP00000126829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEB6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152448.2	usp2a-204	665	162aa	ENSDARP00000126833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152244.2	usp2a-202	434	71aa	ENSDARP00000126799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GE86	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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