Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sept12 ENSDARG00000019191

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Description

septin 12 [Source:ZFIN;Acc:ZDB-GENE-120215-68]

Gene Synonyms

si:dkey-23a11.2

Location

Chromosome 3: 28,502,419-28,627,447 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 4 transcripts (splice variants), 191 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151081.3	sept12-202	4071	822aa	ENSDARP00000126089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000151189.3	sept12-203	2215	355aa	ENSDARP00000126002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000179799.1	sept12-204	1112	355aa	ENSDARP00000147851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150893.2	sept12-201	843	175aa	ENSDARP00000125865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISI2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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