Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: opn1sw2 ENSDARG00000017274

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Description

opsin 1 (cone pigments), short-wave-sensitive 2 [Source:NCBI gene;Acc:30435]

Gene Synonyms

SWS2, bluops, zfblue

Location

Chromosome 11: 25,459,697-25,475,403 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 111 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011178.9	opn1sw2-201	1413	354aa	ENSDARP00000019477.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5J4 Q9W6A8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161481.2	opn1sw2-202	888	226aa	ENSDARP00000137216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMF0	-

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Summary

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