Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: slc16a1a ENSDARG00000016963

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Description

solute carrier family 16 member 1a [Source:ZFIN;Acc:ZDB-GENE-110408-16]

Gene Synonyms

si:ch211-105j21.7

Location

Chromosome 6: 48,978,202-49,049,019 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 3 transcripts (splice variants), 283 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150023.3	slc16a1a-202	2439	461aa	ENSDARP00000123786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149394.2	slc16a1a-201	2429	461aa	ENSDARP00000124803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175254.2	slc16a1a-203	1386	461aa	ENSDARP00000144244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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