Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: casc1 ENSDARG00000016815

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Description

cancer susceptibility candidate 1 [Source:NCBI gene;Acc:566485]

Gene Synonyms

si:dkey-172o10.5

Location

Chromosome 4: 17,245,001-17,251,758 forward strand.

GRCz11:CM002888.2

About this gene

This gene has 6 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110908.4	casc1-202	2193	730aa	ENSDARP00000104413.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R213	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000027645.6	casc1-201	2172	711aa	ENSDARP00000012780.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T1ECS4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184215.1	casc1-206	2133	710aa	ENSDARP00000150346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEL1	-
ENSDART00000132933.3	casc1-203	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138673.2	casc1-205	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138514.3	casc1-204	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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