Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ptpn2a ENSDARG00000016481

.

Description

protein tyrosine phosphatase non-receptor type 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]

Gene Synonyms

hm:zeh1546, ptpn2, zgc:63623

Location

Chromosome 16: 10,055,492-10,071,887 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 229 orthologues and 55 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136168.3	ptpn2a-202	1819	392aa	ENSDARP00000118955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8I4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130382.3	ptpn2a-201	914	272aa	ENSDARP00000109132.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141111.2	ptpn2a-203	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.