Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: gpcpd1 ENSDARG00000016011

.

Description

glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]

Gene Synonyms

si:rp71-81o21.1, zgc:103717

Location

Chromosome 20: 45,669,176-45,722,895 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants) and 214 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027482.10	gpcpd1-201	2366	666aa	ENSDARP00000011048.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124283.3	gpcpd1-202	2001	666aa	ENSDARP00000107604.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVM1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153273.2	gpcpd1-203	345	18aa	ENSDARP00000127231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAG3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.