Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: st3gal3a ENSDARG00000015374

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Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]

Gene Synonyms

SIAT6-r, siat6, st3gal3, st3gal3-r2, zgc:63978

Location

Chromosome 6: 3,334,392-3,405,495 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 5 transcripts (splice variants), 178 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130879.4	st3gal3a-201	1887	375aa	ENSDARP00000107939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000160290.2	st3gal3a-205	1119	372aa	ENSDARP00000141743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXQ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000133707.3	st3gal3a-203	898	232aa	ENSDARP00000125825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISE9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132848.2	st3gal3a-202	574	70aa	ENSDARP00000117672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDW0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134133.2	st3gal3a-204	541	181aa	ENSDARP00000125807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISD4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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