Gene: elavl3 ENSDARG00000014420

Description

ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]

Gene Synonyms

elav-related C, elavC, elrc, etID309927.3, huc, id:ibd1248, wu:fb77b03, zHuC

Location

Chromosome 3: 46,800,190-46,818,001 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 184 orthologues, 28 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028610.8	elavl3-202	3227	359aa	ENSDARP00000030680.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P105	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000166505.3	elavl3-205	4469	358aa	ENSDARP00000130425.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC33	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000013717.9	elavl3-201	1120	345aa	ENSDARP00000012109.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGN3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134092.2	elavl3-204	530	176aa	ENSDARP00000116731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0S9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000133036.2	elavl3-203	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: elavl3 ENSDARG00000014420

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Gene: elavl3 ENSDARG00000014420

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