Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cirbpb ENSDARG00000013351

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Description

cold inducible RNA binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5841]

Gene Synonyms

cirbp, wu:fb12c11, wu:fi20g12, zgc:136559

Location

Chromosome 22: 18,542,010-18,546,649 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 5 transcripts (splice variants), 87 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105405.5	cirbpb-202	1574	224aa	ENSDARP00000096178.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000105404.5	cirbpb-201	1831	220aa	ENSDARP00000096177.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6L4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000171277.2	cirbpb-205	1012	184aa	ENSDARP00000136812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUQ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132156.2	cirbpb-203	643	55aa	ENSDARP00000117191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPW8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138915.2	cirbpb-204	2794	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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