Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:100832 ENSDARG00000012035

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Description

zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]

Location

Chromosome 23: 16,814,968-16,823,262 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 3 transcripts (splice variants), 229 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143424.3	zgc:100832-202	1960	247aa	ENSDARP00000118903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161299.2	zgc:100832-203	3084	247aa	ENSDARP00000130776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142789.3	zgc:100832-201	722	161aa	ENSDARP00000120478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YIY6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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