Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: pspc1 ENSDARG00000006621

.

Description

paraspeckle component 1 [Source:NCBI gene;Acc:692285]

Gene Synonyms

fj85a06, wu:fj85a06, zgc:136470

Location

Chromosome 1: 27,808,916-27,861,148 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102335.5	pspc1-201	2084	512aa	ENSDARP00000093111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160524.2	pspc1-202	1619	398aa	ENSDARP00000141514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX95	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

.

Summary

.

.