Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: slc22a4 ENSDARG00000005335

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Description

solute carrier family 22 member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1517]

Gene Synonyms

octn1, zgc:66036

Location

Chromosome 21: 45,897,814-45,903,536 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 1312 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024342.8	slc22a4-201	1766	553aa	ENSDARP00000021163.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKX0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145081.3	slc22a4-203	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138828.2	slc22a4-202	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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