Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALHM1 ENSDARG00000005314

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Description

si:dkeyp-80c12.5 [Source:ZFIN;Acc:ZDB-GENE-090312-195]

Location

Chromosome 1: 49,501,171-49,505,449 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 2 transcripts (splice variants), 199 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187294.1	CALHM1-202	1011	336aa	ENSDARP00000155766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QRL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132171.2	CALHM1-201	912	304aa	ENSDARP00000114133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JIP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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