Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: PDLIM5 ENSCAFG00000010071

Description

PDZ and LIM domain 5 [Source:VGNC Symbol;Acc:VGNC:44387]

Location

Dog10K_Boxer_Tasha:CM000032.5

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000074935.2	PDLIM5-202	5108	626aa	ENSCAFP00000050651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0T6K8 A0A8P0P0H6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000076226.2	PDLIM5-203	5075	615aa	ENSCAFP00000060738.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PET3 A0A8P0TCL8	-
ENSCAFT00000016017.5	PDLIM5-205	5067	607aa	ENSCAFP00000014814.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PAU7	-
ENSCAFT00000072654.2	PDLIM5-204	4958	576aa	ENSCAFP00000062162.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TDX9	-
ENSCAFT00000073162.2	PDLIM5-206	4730	487aa	ENSCAFP00000062592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PMJ9	-
ENSCAFT00000060742.2	PDLIM5-201	4688	473aa	ENSCAFP00000055849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0T663 A0A8P0P569	-
ENSCAFT00000087286.2	PDLIM5-207	2122	234aa	ENSCAFP00000053729.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TAH2 A0A8P0T643	-

Summary