Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VSX1 ENSCAFG00000004368

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Description

visual system homeobox 1 [Source:VGNC Symbol;Acc:VGNC:48312]

Location

Primary_assembly 23: 1,298,764-1,304,409 reverse strand.

Dog10K_Boxer_Tasha:CM000023.4

About this gene

This gene has 2 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000007019.4	VSX1-201	1092	364aa	ENSCAFP00000006497.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0P5Y4 A0A8I3QPX1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000079301.2	VSX1-202	702	234aa	ENSCAFP00000052159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0SGC3 A0A8I3Q493	-

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Summary

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