Transcript: ENSBTAT00000047158.5 EPDR1-201

Description

ependymin related 1 [Source:VGNC Symbol;Acc:VGNC:28530]

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features and is associated with 1267 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000047158.5	EPDR1-201	969	236aa	ENSBTAP00000044382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000107509.1	EPDR1-202	675	224aa	ENSBTAP00000094394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 969 bps, Translation length: 236 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6QLI0

Version

ENSBTAT00000047158.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 3.