Transcript: ENSBTAT00000043035.3 SLIRP-201

Description

SRA stem-loop interacting RNA binding protein [Source:VGNC Symbol;Acc:VGNC:55144]

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features and is associated with 828 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000103779.1	SLIRP-202	298	98aa	ENSBTAP00000084860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000043035.3	SLIRP-201	280	92aa	ENSBTAP00000040631.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ98	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 280 bps, Translation length: 92 residues

Version

ENSBTAT00000043035.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.