Transcript: ENSBTAT00000030846.6 SGIP1-205

Description

SH3GL interacting endocytic adaptor 1 [Source:VGNC Symbol;Acc:VGNC:34540]

Location

Primary_assembly 3: 78,580,089-78,810,355 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 22 domains and features and is associated with 7449 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000011091.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098753.1	SGIP1-203	3199	852aa	ENSBTAP00000100497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000125832.1	SGIP1-204	3118	825aa	ENSBTAP00000096127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000130654.1	SGIP1-201	3069	793aa	ENSBTAP00000097986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000077270.2	SGIP1-202	2517	609aa	ENSBTAP00000071594.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKX7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000030846.6	SGIP1-205	2431	655aa	ENSBTAP00000030815.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJV6	-
ENSBTAT00000122940.1	SGIP1-206	2369	674aa	ENSBTAP00000092218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000115284.1	SGIP1-208	1721	459aa	ENSBTAP00000091832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000102998.1	SGIP1-207	1376	343aa	ENSBTAP00000097428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 2,431 bps, Translation length: 655 residues

Version

ENSBTAT00000030846.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000030846.6 SGIP1-205

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Transcript: ENSBTAT00000030846.6 SGIP1-205

Summary

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