Transcript: ENSBTAT00000020965.5 BCAN-202

Description

brevican [Source:VGNC Symbol;Acc:VGNC:26434]

Location

About this transcript

This transcript has 14 exons, is annotated with 55 domains and features and is associated with 2356 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082695.2	BCAN-201	3410	995aa	ENSBTAP00000065021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQ31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020965.5	BCAN-202	3368	912aa	ENSBTAP00000020965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQ31	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,368 bps, Translation length: 912 residues

Version

ENSBTAT00000020965.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.