Transcript: ENSBTAT00000011874.7 SH3PXD2B-201

Description

SH3 and PX domains 2B [Source:VGNC Symbol;Acc:VGNC:34578]

Location

About this transcript

This transcript has 14 exons, is annotated with 41 domains and features and is associated with 6821 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000077196.2	SH3PXD2B-202	3978	928aa	ENSBTAP00000064638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000011874.7	SH3PXD2B-201	3939	921aa	ENSBTAP00000011874.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MW39	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,939 bps, Translation length: 921 residues

Version

ENSBTAT00000011874.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.