Transcript: ENSBTAT00000008498.5 PTCD3-202

Description

pentatricopeptide repeat domain 3 [Source:VGNC Symbol;Acc:VGNC:33491]

Location

Primary_assembly 11: 48,727,831-48,758,984 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 10 domains and features and is associated with 1967 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000006482.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000126450.1	PTCD3-201	2732	727aa	ENSBTAP00000075785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000008498.5	PTCD3-202	2615	688aa	ENSBTAP00000008498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KI62	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000074341.2	PTCD3-203	2603	684aa	ENSBTAP00000064745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M8H3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000131178.1	PTCD3-204	2468	639aa	ENSBTAP00000086443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,615 bps, Translation length: 688 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2KI62

Version

ENSBTAT00000008498.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000008498.5 PTCD3-202

Summary

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Transcript: ENSBTAT00000008498.5 PTCD3-202

Summary

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