Transcript: ENSBTAT00000006949.6 VPS39-201

Description

VPS39 subunit of HOPS complex [Source:VGNC Symbol;Acc:VGNC:36822]

Location

About this transcript

This transcript has 25 exons, is annotated with 10 domains and features and is associated with 3279 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006949.6	VPS39-201	3923	901aa	ENSBTAP00000006949.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BM41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000130804.1	VPS39-202	3483	853aa	ENSBTAP00000083744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000134859.1	VPS39-203	3432	830aa	ENSBTAP00000096140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000130873.1	VPS39-204	3247	874aa	ENSBTAP00000094979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,923 bps, Translation length: 901 residues

Version

ENSBTAT00000006949.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.