Transcript: ENSBTAT00000002461.7 RUBCN-204

Description

rubicon autophagy regulator [Source:VGNC Symbol;Acc:VGNC:34212]

Location

Primary_assembly 1: 70,384,588-70,433,147 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features and is associated with 2812 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000001890.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061001.4	RUBCN-203	3125	939aa	ENSBTAP00000053836.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BK05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000082224.2	RUBCN-205	3931	917aa	ENSBTAP00000067098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1C0	-
ENSBTAT00000002461.7	RUBCN-204	2696	796aa	ENSBTAP00000002461.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QIF2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077299.2	RUBCN-202	1945	563aa	ENSBTAP00000065889.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M770	-
ENSBTAT00000088671.1	RUBCN-201	1727	467aa	ENSBTAP00000095341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,696 bps, Translation length: 796 residues

Version

ENSBTAT00000002461.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000002461.7 RUBCN-204

Summary

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Transcript: ENSBTAT00000002461.7 RUBCN-204

Summary

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