Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDCD6 ENSBTAG00000046493

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Description

programmed cell death 6 [Source:VGNC Symbol;Acc:VGNC:32663]

Location

Primary_assembly 20: 71,780,646-71,796,948 reverse strand.

ARS-UCD1.3:CM008187.2

About this gene

This gene has 7 transcripts (splice variants), 188 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094562.1	PDCD6-206	1127	297aa	ENSBTAP00000091391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000120999.1	PDCD6-204	1727	296aa	ENSBTAP00000090678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000064656.3	PDCD6-201	1253	190aa	ENSBTAP00000055204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZ81	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000121297.1	PDCD6-202	1091	136aa	ENSBTAP00000103009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000121170.1	PDCD6-203	1046	121aa	ENSBTAP00000077879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000070994.2	PDCD6-205	247	67aa	ENSBTAP00000070508.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M978	-
ENSBTAT00000071270.2	PDCD6-207	202	53aa	ENSBTAP00000056743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LF77	-

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Summary

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