Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NPC1L1 ENSBTAG00000044146

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Description

NPC1 like intracellular cholesterol transporter 1 [Source:VGNC Symbol;Acc:VGNC:32195]

Location

Primary_assembly 4: 76,891,033-76,913,255 forward strand.

ARS-UCD1.3:CM008171.2

About this gene

This gene has 4 transcripts (splice variants), 189 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000079585.2	NPC1L1-203	5163	1333aa	ENSBTAP00000065736.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000084755.2	NPC1L1-204	5025	1287aa	ENSBTAP00000063929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3B6	-
ENSBTAT00000073246.2	NPC1L1-201	5021	1272aa	ENSBTAP00000057727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MT06	-
ENSBTAT00000066965.2	NPC1L1-202	2341	726aa	ENSBTAP00000060006.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LS28	-

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Summary

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