Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHYHD1 ENSBTAG00000038831

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Description

phytanoyl-CoA dioxygenase domain containing 1 [Source:NCBI gene (formerly Entrezgene);Acc:540828]

Location

Primary_assembly 11: 99,423,973-99,445,102 forward strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues and 209 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133145.1	PHYHD1-201	1879	346aa	ENSBTAP00000087997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000131265.1	PHYHD1-204	1990	305aa	ENSBTAP00000091023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000055396.3	PHYHD1-203	1336	291aa	ENSBTAP00000048693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSW9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000077279.2	PHYHD1-202	1273	270aa	ENSBTAP00000073098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MFV0	-

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Summary

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