Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX24 ENSBTAG00000031069

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Description

sorting nexin 24 [Source:VGNC Symbol;Acc:VGNC:35103]

Location

Primary_assembly 7: 30,786,887-30,977,434 reverse strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 5 transcripts (splice variants), 191 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000084032.2	SNX24-203	717	189aa	ENSBTAP00000058936.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000117868.1	SNX24-204	2287	154aa	ENSBTAP00000089272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000043983.4	SNX24-205	2046	169aa	ENSBTAP00000041510.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q17QS1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000082993.2	SNX24-202	774	172aa	ENSBTAP00000057224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQH6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000085434.2	SNX24-201	590	156aa	ENSBTAP00000072409.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MML5	-

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Summary

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