Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMC1B ENSBTAG00000024132

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Description

structural maintenance of chromosomes 1B [Source:VGNC Symbol;Acc:VGNC:34998]

Location

Primary_assembly 5: 115,735,732-115,818,182 reverse strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110144.1	SMC1B-201	4422	1235aa	ENSBTAP00000103751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000114885.1	SMC1B-202	4218	1167aa	ENSBTAP00000076880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000127018.1	SMC1B-203	4200	1161aa	ENSBTAP00000087457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000014005.6	SMC1B-204	4093	1198aa	ENSBTAP00000014005.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6C8	-
ENSBTAT00000123099.1	SMC1B-205	3948	1152aa	ENSBTAP00000083027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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