Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CROT ENSBTAG00000021535

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Description

carnitine O-octanoyltransferase [Source:VGNC Symbol;Acc:VGNC:27723]

Location

Primary_assembly 4: 33,079,166-33,144,212 reverse strand.

ARS-UCD1.3:CM008171.2

About this gene

This gene has 6 transcripts (splice variants), 216 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102217.1	CROT-205	2411	643aa	ENSBTAP00000080395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000076118.2	CROT-202	3017	619aa	ENSBTAP00000071426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O19094	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000112611.1	CROT-203	3008	616aa	ENSBTAP00000098533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000133352.1	CROT-201	2820	600aa	ENSBTAP00000083626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000028699.7	CROT-204	2062	574aa	ENSBTAP00000028699.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5E5R3	-
ENSBTAT00000106533.1	CROT-206	2042	227aa	ENSBTAP00000087274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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