Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STXBP5 ENSBTAG00000021107

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Description

syntaxin binding protein 5 [Source:VGNC Symbol;Acc:VGNC:35448]

Location

Primary_assembly 9: 84,506,678-84,661,261 forward strand.

ARS-UCD1.3:CM008176.2

About this gene

This gene has 5 transcripts (splice variants), 288 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061280.4	STXBP5-201	4306	1151aa	ENSBTAP00000053504.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BNK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000073234.2	STXBP5-203	4220	1136aa	ENSBTAP00000057082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKT6	-
ENSBTAT00000083985.2	STXBP5-204	4160	1116aa	ENSBTAP00000059562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LW14	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000082509.2	STXBP5-205	4109	1099aa	ENSBTAP00000069753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKK0	-
ENSBTAT00000093047.1	STXBP5-202	3729	1086aa	ENSBTAP00000086444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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