Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNGAP1 ENSBTAG00000020975

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Description

synaptic Ras GTPase activating protein 1 [Source:VGNC Symbol;Acc:VGNC:35523]

Location

Primary_assembly 23: 7,595,584-7,624,654 forward strand.

ARS-UCD1.3:CM008190.2

About this gene

This gene has 5 transcripts (splice variants), 277 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027936.7	SYNGAP1-202	4939	1346aa	ENSBTAP00000027936.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000123754.1	SYNGAP1-205	4848	1287aa	ENSBTAP00000088017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000128118.1	SYNGAP1-204	4568	1260aa	ENSBTAP00000079652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000130036.1	SYNGAP1-201	4173	1302aa	ENSBTAP00000101979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000128961.1	SYNGAP1-203	3875	1204aa	ENSBTAP00000080218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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